PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT08088
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 118aa    MW: 13495.6 Da    PI: 6.3847
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT08088genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.25.2e-12249454
              HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
              +h ++Er+RR+++N+ +  Lr l P     + k+ + a+i   A+e+I++L
  EMT08088  2 SHIAVERNRRRQMNDHLKVLRALTPAF---YIKRCDQASIIGGAIEFIREL 49
              89************************9...9******************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.15E-10154No hitNo description
PROSITE profilePS5088814.583149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-13156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.8E-9249IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-11251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.3E-8455IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010374Biological Processstomatal complex development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    Send to blast
MSHIAVERNR RRQMNDHLKV LRALTPAFYI KRCDQASIIG GAIEFIRELH TAARIVALLE  60
SLHLEVLHVN ISTMDDTALH SFVLKIGLEC QLSVEDVAFE VQQTFCYHQE LDYSSMAI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014518209.14e-27PREDICTED: transcription factor MUTE
SwissprotQ9M8K61e-25MUTE_ARATH; Transcription factor MUTE
TrEMBLM8BYR39e-83M8BYR3_AEGTA; Transcription factor MUTE
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP111443441
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.13e-26bHLH family protein